PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0016s0102.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 201aa    MW: 22865.3 Da    PI: 5.064
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0016s0102.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.91.6e-1746134185
                          EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 
                          f k+l +sdv+ ++r++lpkk ae+h    ++k  e++ ++++d++g   W++k+++  +++s++yv++ +  +Fv a+gL++gD ++ +
  Kalax.0016s0102.1.p  46 FRKILQKSDVSYLRRIILPKKAAEAHlpvlQIK--EGIPIKIYDLDGrHIWTFKYRFwpNNSSRMYVFE-NAGDFVAAHGLQAGDCFIMY 132
                          889*************************76555..66779999****678*****99888888889999.9****************999 PP

                          E- CS
                   B3  84 ld 85 
                          ld
  Kalax.0016s0102.1.p 133 LD 134
                          76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.40.330.102.4E-2341142IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.42E-2244134IPR015300DNA-binding pseudobarrel domain
CDDcd100178.33E-2644146No hitNo description
PfamPF023621.6E-1446142IPR003340B3 DNA binding domain
PROSITE profilePS508639.34746148IPR003340B3 DNA binding domain
SMARTSM010191.5E-1746148IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008284Biological Processpositive regulation of cell proliferation
GO:0009733Biological Processresponse to auxin
GO:0010116Biological Processpositive regulation of abscisic acid biosynthetic process
GO:0010262Biological Processsomatic embryogenesis
GO:0010373Biological Processnegative regulation of gibberellin biosynthetic process
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
SEASTLSSYS SICEIPFPSL LIYFYLFSSD VFPDLDIDRT NLRFLFRKIL QKSDVSYLRR  60
IILPKKAAEA HLPVLQIKEG IPIKIYDLDG RHIWTFKYRF WPNNSSRMYV FENAGDFVAA  120
HGLQAGDCFI MYLDIVTQNL VIEAKKSEVS DERKVIIAAE SEVKPIRSSA VVPDYILTPP  180
APEVANPPSD IFVNFPPLED S
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00382DAPTransfer from AT3G26790Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010425402.15e-52PREDICTED: B3 domain-containing transcription factor FUS3-like
SwissprotQ9LW313e-53FUS3_ARATH; B3 domain-containing transcription factor FUS3
TrEMBLV4TII38e-51V4TII3_9R
STRINGAT3G26790.18e-51(Arabidopsis thaliana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-54B3 family protein